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makeflow_viz(1) Cooperative Computing Tools makeflow_viz(1)


makeflow_viz - visualization of Makeflow workflows


makeflow_viz [options] <dagfile>


makeflow_viz is a collection of tools to graphically display workflows. This includes DOT and PPM.



 -v, --version
Show version string.
 -h, --help
Show help message.

Translate the makeflow to the desired visualization format:
dot DOT file format for precise graph drawing.
ppm PPM file format for rapid iconic display.
cyto Cytoscape format for browsing and customization.
dax DAX format for use by the Pegasus workflow manager.
json JSON representation of the DAG.
Options for dot output:
Condense similar boxes
Change the size of the boxes proportional to file size
Show only shapes with no text labels.
Display a more detailed graph including an operating sandbox for each task.
Set task label to ID number instead of command.
Set graph attributes.
Set node attributes.
Set edge attributes.
Set task attributes.
Set file attributes.
The following options for ppm generation are mutually exclusive:
 --ppm-highlight-row <row>
Highlight row <row> in completion grap
 --ppm-highlight-file <file>
Highlight node that creates file <file> in completion graph
 --ppm-highlight-executable <exe>
Highlight executable <exe> in completion grap
Display different levels of depth in completion graph
Options for JSON output:
Use JSON format for the workflow specification.
Use JX format for the workflow specification.
 --jx-args <<file>>
Evaluate the JX input with keys and values in file defined as variables.
 --jx-define <<var>=<expr>>
Set the JX variable VAR to the JX expression EXPR.


To produce a DOT representation of the workflow

makeflow_viz -D dot Makeflow

To produce a cytoscape representation of the workflow

makeflow_viz -D cyto Makeflow


The Cooperative Computing Tools are Copyright (C) 2005-2019 The University of Notre Dame. This software is distributed under the GNU General Public License. See the file COPYING for details.


CCTools 7.1.2 FINAL