table of contents
| BAMHEADRG.PY(1) | User Commands | BAMHEADRG.PY(1) |
NAME¶
bamheadrg.py - Inject readgroup info
SYNOPSIS¶
bamheadrg.py [-h] [-r READGROUP] -d DONOR [-S] [recipient]
DESCRIPTION¶
Inject readgroup info
OPTIONS¶
positional arguments:¶
- recipient
- SAM file to inject header lines into. If '-' or absent then defaults to stdin.
optional arguments:¶
- -h, --help
- show this help message and exit
- -r READGROUP, --readgroup READGROUP
- Read group(s) to extract (comma separated)
- -d DONOR, --donor DONOR
- Donor BAM/SAM file to extract read group info
- -S, --donor_is_sam
- Donor file is SAM
AUTHOR¶
This manpage was written by Andreas Tille for the Debian
distribution and
can be used for any other usage of the program.
| June 2020 | bamheadrg.py 0.0.1+git20170413.ccd079d |