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mk_adni_phantom(1) The Computational Morphometry Toolkit mk_adni_phantom(1)


mk_adni_phantom - Generate ADNI phantom image


mk_adni_phantom OutputImage


Generate image of the ADNI structural imaging calibration phantom (a.k.a. Magphan EMR051).


Global Toolkit Options (these are shared by all CMTK tools)

Write list of basic command line options to standard output.
Write complete list of basic and advanced command line options to standard output.
Write list of command line options to standard output in MediaWiki markup.
Write man page source in 'nroff' markup to standard output.
Write toolkit version to standard output.
Write the current command line to standard output.
Set verbosity level.
Increment verbosity level by 1 (deprecated; supported for backward compatibility).
Set maximum number of parallel threads (for POSIX threads and OpenMP).

Main Options

Set output image resolution in [mm] [Default: 1]
Draw each marker sphere with a label value defined by its index in the marker table. Otherwise, estimated T1 is used.
Optional path to write text file with label names. [Default: NONE]
Optional path to write text file with landmark locations. [Default: NONE]


Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, Daniel B. Russakoff, and Yaroslav Halchenko



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CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium on Alcohol and Neurodevelopment in Adolescence (N-CANDA): Data Integration Component. From April 2009 through September 2011, CMTK development and maintenance was supported by the NIBIB under Grant EB008381.

Jun 6 2022 CMTK 3.3.1p2