Name¶
SWISS::Ref.pm
Description¶
SWISS::Ref represents a single reference of a SWISS-PROT + TREMBL entry
as specified in the user manual
http://www.expasy.org/sprot/userman.html .
Inherits from¶
SWISS::BaseClass.pm
Attributes¶
- "RN"
- The reference number.
- "RP"
- The RP line(s), unwrapped as a string.
- "RC"
- Zero or more RC lines.
Data structure: {Token}[qualifier1, qualifierN].
A hash of arrays. Hash keys are the RC tokens, array elements are the
qualifiers for that token.
- "RX"
- References to bibliographic databases.
Data structure: {Database}[identifier1, identifierN].
A hash of arrays. Hash keys are the names of bibliographic databases, array
elements are the identifiers of the reference for that database.
- "RG"
- The RG line(s), unwrapped as a string.
- "RA"
- The list of Authors.
An object of type SWISS::ListBase.
- "RT"
- The publication title, unwrapped as a string.
- "RL"
- The RL line.
Data structure: String.
Methods¶
Standard methods¶
- new
- fromText
- toText
Writing methods¶
- add_MedlineID
- Add a RX line 'MEDLINE; nnnnnnnn.' to the reference.
- add_Author
- Add an author to the RA line of the reference.
- rc_sort
- Sort elements of the RC line alphabetically.