.\" Automatically generated by Pod::Man 2.25 (Pod::Simple 3.16) .\" .\" Standard preamble: .\" ======================================================================== .de Sp \" Vertical space (when we can't use .PP) .if t .sp .5v .if n .sp .. .de Vb \" Begin verbatim text .ft CW .nf .ne \\$1 .. .de Ve \" End verbatim text .ft R .fi .. .\" Set up some character translations and predefined strings. \*(-- will .\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left .\" double quote, and \*(R" will give a right double quote. \*(C+ will .\" give a nicer C++. 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Always turn off hyphenation; it makes .\" way too many mistakes in technical documents. .if n .ad l .nh .SH "NAME" PDL::IO::HDF5::Dataset \- PDL::IO::HDF5 Helper Object representing HDF5 datasets. .SH "DESCRIPTION" .IX Header "DESCRIPTION" This is a helper-object used by \s-1PDL::IO::HDF5\s0 to interface with \s-1HDF5\s0 format's dataset objects. Information on the \s-1HDF5\s0 Format can be found at the \s-1NCSA\s0's web site at http://hdf.ncsa.uiuc.edu/ . .SH "SYNOPSIS" .IX Header "SYNOPSIS" See \s-1PDL::IO::HDF5\s0 .SH "MEMBER DATA" .IX Header "MEMBER DATA" .IP "\s-1ID\s0" 1 .IX Item "ID" \&\s-1ID\s0 number given to the dataset by the \s-1HDF5\s0 library .IP "name" 1 .IX Item "name" Name of the dataset. .IP "parent" 1 .IX Item "parent" Ref to parent object (group) that owns this dateset. .IP "fileObj" 1 .IX Item "fileObj" Ref to the \s-1PDL::IO::HDF5\s0 object that owns this object. .SH "METHODS" .IX Header "METHODS" ####\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\- .SS "new" .IX Subsection "new" PDL::IO::HDF5::Dataset Constructor \- creates new object .PP \&\fBUsage:\fR .PP This object will usually be created using the calling format detailed in the \s-1SYNOPSIS\s0. The following syntax is used by the \s-1PDL::IO::HDF5\s0 object to build the object. .PP .Vb 6 \& $a = new PDL::IO::HDF5:Dataset( name => $name, parent => $parent, \& fileObj => $fileObj); \& Args: \& $name Name of the dataset \& $parent Parent Object that owns this dataset \& $fileObj PDL::HDF object that owns this dateset. .Ve .SS "\s-1DESTROY\s0" .IX Subsection "DESTROY" PDL::IO::HDF5::Dataset Destructor \- Closes the dataset object .PP \&\fBUsage:\fR .PP .Vb 1 \& No Usage. Automatically called .Ve .SS "set" .IX Subsection "set" Write data to the \s-1HDF5\s0 dataset .PP \&\fBUsage:\fR .PP .Vb 1 \& $dataset\->set($pdl); # Write the array data in the dataset .Ve .SS "get" .IX Subsection "get" Get data from a \s-1HDF5\s0 dataset to a \s-1PDL\s0 .PP \&\fBUsage:\fR .PP .Vb 2 \& $pdl = $dataset\->get; # Read the Array from the HDF5 dataset, create a PDL from it \& # and put in $pdl \& \& # Assuming $dataset is three dimensional \& # with dimensions (20,100,90) .Ve .PP The \fIget\fR method can also be used to obtain particular slices or hyperslabs of the dataset array. For example, if \f(CW$dataset\fR is three dimensional with dimensions (20,100,90) then we could do: .PP .Vb 3 \& $start=pdl([0,0,0]); # We begin the slice at the very beggining \& $end=pdl([19,0,0]); # We take the first vector of the array, \& $stride=pdl([2,1,1]); # taking only every two values of the vector \& \& $pdl = $dataset\->get($start,$end,[$stride]); # Read a slice or \& # hyperslab from the HDF5 dataset. \& # $start, $end and optionally $stride \& # should be PDL vectors with length the \& # number of dimensions of the dataset. \& # $start gives the starting coordinates \& # in the array. \& # $end gives the ending coordinate \& # in the array \& # $stride gives the steps taken from one \& # coordinate to the next of the slice .Ve .PP The mapping of \s-1HDF5\s0 datatypes in the file to \s-1PDL\s0 datatypes in memory will be according to the following table. .PP .Vb 10 \& HDF5 File Type PDL Type \& \-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\- \-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\-\- \& PDL::IO::HDF5::H5T_C_S1() => PDL::Char Object (Special Case for Char Strings) \& PDL::IO::HDF5::H5T_STD_I8BE() => $PDL::Types::PDL_B \& PDL::IO::HDF5::H5T_STD_I8LE() => $PDL::Types::PDL_B, \& PDL::IO::HDF5::H5T_STD_U8BE() => $PDL::Types::PDL_S, \& PDL::IO::HDF5::H5T_STD_U8LE() => $PDL::Types::PDL_S, \& PDL::IO::HDF5::H5T_STD_I16BE() => $PDL::Types::PDL_S, \& PDL::IO::HDF5::H5T_STD_I16LE() => $PDL::Types::PDL_S, \& PDL::IO::HDF5::H5T_STD_U16BE() => $PDL::Types::PDL_L, \& PDL::IO::HDF5::H5T_STD_U16LE() => $PDL::Types::PDL_L, \& PDL::IO::HDF5::H5T_STD_I32BE() => $PDL::Types::PDL_L, \& PDL::IO::HDF5::H5T_STD_I32LE() => $PDL::Types::PDL_L, \& PDL::IO::HDF5::H5T_STD_U32LE() => $PDL::Types::PDL_LL, \& PDL::IO::HDF5::H5T_STD_U32BE() => $PDL::Types::PDL_LL, \& PDL::IO::HDF5::H5T_STD_I64LE() => $PDL::Types::PDL_LL, \& PDL::IO::HDF5::H5T_STD_I64BE() => $PDL::Types::PDL_LL, \& PDL::IO::HDF5::H5T_IEEE_F32BE()=> $PDL::Types::PDL_F, \& PDL::IO::HDF5::H5T_IEEE_F32LE()=> $PDL::Types::PDL_F, \& PDL::IO::HDF5::H5T_IEEE_F64BE()=> $PDL::Types::PDL_D, \& PDL::IO::HDF5::H5T_IEEE_F64LE()=> $PDL::Types::PDL_D .Ve .PP For \s-1HDF5\s0 File types not in this table, this method will attempt to map it to the default \s-1PDL\s0 type \s-1PDL_D\s0. .PP \&\fBNote:\fR .PP Character arrays are returned as the special PDL::Char fixed-length string type. For fixed-length \&\s-1HDF5\s0 string arrays, this is a direct mapping to the PDL::Char datatype. For \s-1HDF5\s0 variable-length string arrays, the data is converted to a fixed-length character array, with a string size equal to the maximum size of all the strings in the array. .SS "dims" .IX Subsection "dims" Get the dims for a \s-1HDF5\s0 dataset. For example, a 3 x 4 array would return a perl array (3,4); .PP \&\fBUsage:\fR .PP .Vb 1 \& @pdl = $dataset\->dims; # Get an array of dims. .Ve .SS "attrSet" .IX Subsection "attrSet" Set the value of an attribute(s) .PP Attribute types supported are null-terminated strings and \s-1PDL\s0 matrices .PP \&\fBUsage:\fR .PP .Vb 7 \& $dataset\->attrSet( \*(Aqattr1\*(Aq => \*(Aqattr1Value\*(Aq, \& \*(Aqattr2\*(Aq => \*(Aqattr2 value\*(Aq, \& \*(Aqattr3\*(Aq => $pdl, \& . \& . \& . \& ); .Ve .PP Returns undef on failure, 1 on success. .SS "attrDel" .IX Subsection "attrDel" Delete attribute(s) .PP \&\fBUsage:\fR .PP .Vb 6 \& $dataset\->attrDel( \*(Aqattr1\*(Aq, \& \*(Aqattr2\*(Aq, \& . \& . \& . \& ); .Ve .PP Returns undef on failure, 1 on success. .SS "attrs" .IX Subsection "attrs" Get a list of all attribute names associated with a dataset .PP \&\fBUsage:\fR .PP .Vb 1 \& @attrs = $dataset\->attrs; .Ve .SS "attrGet" .IX Subsection "attrGet" Get the value of an attribute(s) .PP Currently the attribute types supported are null-terminated strings and PDLs. .PP \&\fBUsage:\fR .PP .Vb 1 \& my @attrs = $dataset\->attrGet( \*(Aqattr1\*(Aq, \*(Aqattr2\*(Aq); .Ve .SS "IDget" .IX Subsection "IDget" Returns the \s-1HDF5\s0 library \s-1ID\s0 for this object .PP \&\fBUsage:\fR .PP .Vb 1 \& my $ID = $dataSetObj\->IDget; .Ve .SS "nameGet" .IX Subsection "nameGet" Returns the \s-1HDF5\s0 Dataset Name for this object. .PP \&\fBUsage:\fR .PP .Vb 1 \& my $name = $datasetObj\->nameGet; .Ve