.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.40.9.
.TH LAST-REDUCE-ALIGNMENTS.SH "1" "May 2012" "last-reduce-alignments.sh 199" "User Commands"
.SH NAME
last-reduce-alignments.sh \- Clean up MAF-format alignments
.SH SYNOPSIS
.B last-reduce-alignments.sh
[\fIoptions\fR] \fIlast-output.maf\fR
.SH OPTIONS
.TP
\fB\-h\fR
show this help message and exit
.TP
\fB\-d\fR
reduce alignments more aggressively