.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.40.9.
.TH FASTX_RENAMER "1" "May 2012" "fastx_renamer 0.0.13.2" "User Commands"
.SH NAME
fastx_renamer \- FASTA/Q Renamer
.SH DESCRIPTION
usage: fastx_renamer [\-n TYPE] [\-h] [\-z] [\-v] [\-i INFILE] [\-o OUTFILE]
Part of FASTX Toolkit 0.0.13.2 by A. Gordon (gordon@cshl.edu)
.TP
[\-n TYPE]
= rename type:
.IP
SEQ \- use the nucleotides sequence as the name.
COUNT \- use simply counter as the name.
.TP
[\-h]
= This helpful help screen.
.TP
[\-z]
= Compress output with GZIP.
.TP
[\-i INFILE]
= FASTA/Q input file. default is STDIN.
.IP
[\-o OUTFILE] = FASTA/Q output file. default is STDOUT.
.SH SEE ALSO
The quality of this automatically generated manpage might be
insufficient.  It is suggested to visit
.IP
http://hannonlab.cshl.edu/fastx_toolkit/commandline.html
.P
to get a better layout as well as an overview about connected
FASTX tools.