.TH RUN_TIPP_TOOL.PY "1" "October 2020" "run_tipp_tool.py" "User Commands"
.SH NAME
run_tipp_tool.py \- helper tool to convert a classification file into a profile
.SH DESCRIPTION
usage: run_tipp_tool.py [\-h] [\-g GENE] \fB\-a\fR ACTION [\-o OUTPUT] [\-p PREFIX]
.IP
[\-i INPUT] [\-t THRESHOLD]
.PP
Performs various tools for TIPP.
.SS "optional arguments:"
.TP
\fB\-h\fR, \fB\-\-help\fR
show this help message and exit
.TP
\fB\-g\fR GENE, \fB\-\-gene\fR GENE
use GENE's reference package
.TP
\fB\-a\fR ACTION, \fB\-\-action\fR ACTION
Run ACTION
.TP
\fB\-o\fR OUTPUT, \fB\-\-output\fR OUTPUT
OUTPUT directory
.TP
\fB\-p\fR PREFIX, \fB\-\-prefix\fR PREFIX
PREFIX
.TP
\fB\-i\fR INPUT, \fB\-\-input\fR INPUT
INPUT destination
.TP
\fB\-t\fR THRESHOLD, \fB\-\-threshold\fR THRESHOLD
threshold for classification
.IP
[\-i INPUT] [\-t THRESHOLD]
.SH "SEE ALSO"
\fBrun_tipp.py\fR(1)