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EXTRACTUNMAPPEDSUBREADS(1) User Commands EXTRACTUNMAPPEDSUBREADS(1)

NAME

extractUnmappedSubreads - Extract unmapped subreads from a fasta file

DESCRIPTION

usage: extractUnmappedSubreads [-h] [--verbose] [--version] [--profile]

[--debug]
fasta cmp.h5 [cmp.h5 ...]

Extract unmapped subreads from a fasta file.

positional arguments:

a fasta file containing all subreads.
input cmp.h5 files.

optional arguments:

show this help message and exit
Set the verbosity level (default: None)
show program's version number and exit
Print runtime profile at exit (default: False)
Catch exceptions in debugger (requires ipdb) (default: False)

AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.

October 2018 extractUnmappedSubreads 0.3.1