.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.3.
.TH MCVERTER "1" "December 2022" "mcverter 2.1.0" "User Commands"
.SH NAME
mcverter \- non-interactive MRI conversion software
.SH SYNOPSIS
.B mcverter
[\fI\,-h\/\fR] \fI\,-o <str> -f <str> \/\fR[\fI\,-v\/\fR] [\fI\,-q\/\fR] [\fI\,-V\/\fR] [\fI\,-j\/\fR] [\fI\,-x\/\fR] [\fI\,-d\/\fR] [\fI\,-a\/\fR] [\fI\,-n\/\fR] [\fI\,-b\/\fR] [\fI\,-r\/\fR] [\fI\,-u\/\fR] [\fI\,-s <str>\/\fR] [\fI\,-m <str>\/\fR] [\fI\,-F <str>\/\fR] \fI\,Input directory or file(s)\/\fR...
.SH DESCRIPTION
.TP
\fB\-h\fR, \fB\-\-help\fR
Show this help message
.TP
\fB\-o\fR, \fB\-\-output=\fR<str>
Output directory for converted files
.TP
\fB\-f\fR, \fB\-\-format=\fR<str>
Output format: fsl, spm, meta, nifti, analyze, or bv.
.TP
\fB\-v\fR, \fB\-\-verbose\fR
Verbose mode
.TP
\fB\-q\fR, \fB\-\-quiet\fR
Quiet mode
.TP
\fB\-V\fR, \fB\-\-version\fR
Version information
.TP
\fB\-j\fR, \fB\-\-split_subj\fR
Save each subject to a separate directory
.TP
\fB\-x\fR, \fB\-\-split_dir\fR
Save each series to a separate directory
.TP
\fB\-d\fR, \fB\-\-fourd\fR
Save output volumes as 4D files
.TP
\fB\-a\fR, \fB\-\-ho\fR
Save header only (metaimage only)
.TP
\fB\-n\fR, \fB\-\-nii\fR
Save files as .nii (nifti/fsl only)
.TP
\fB\-b\fR, \fB\-\-v16\fR
Save .v16 files (BrainVoyager only)
.TP
\fB\-r\fR, \fB\-\-rescale\fR
Apply rescale slope and intercept to data
.TP
\fB\-u\fR, \fB\-\-patientid\fR
Use patient id instead of patient name for output file
.TP
\fB\-s\fR, \fB\-\-skip=\fR<str>
Skip first 'arg' volumes
.TP
\fB\-m\fR, \fB\-\-match=\fR<str>
Only convert files whose series descriptions include this string
.TP
\fB\-F\fR, \fB\-\-fnformat=\fR<str>
Use this format for name of output file:
.PP
format = {format element} ;
some text = {filesystem\-legal characters} ;
format element = {some text} , {"%" "PN" | "PI" | "SD" | "ST" | "SI" | "TD" | "SN" | "SQ" | "PR" | "RD"} , {some text} ;
or
format = {"+" | "\-" , "PatientName" | "PatientId" | "SeriesDate" | "SeriesTime" | "StudyId" | "StudyDescription" | "SeriesNumber" | "SequenceName" | "ProtocolName" | "SeriesDescription"