'\" t
.\"     Title: gt-stat
.\"    Author: [FIXME: author] [see http://www.docbook.org/tdg5/en/html/author]
.\" Generator: DocBook XSL Stylesheets vsnapshot <http://docbook.sf.net/>
.\"      Date: 02/28/2024
.\"    Manual: GenomeTools Manual
.\"    Source: GenomeTools 1.6.5
.\"  Language: English
.\"
.TH "GT\-STAT" "1" "02/28/2024" "GenomeTools 1\&.6\&.5" "GenomeTools Manual"
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.SH "NAME"
gt-stat \- Show statistics about features contained in GFF3 files\&.
.SH "SYNOPSIS"
.sp
\fBgt stat\fR [option \&...] [GFF3_file \&...]
.SH "DESCRIPTION"
.PP
\fB\-genelengthdistri\fR [\fIyes|no\fR]
.RS 4
show gene length distribution (default: no)
.RE
.PP
\fB\-genescoredistri\fR [\fIyes|no\fR]
.RS 4
show gene score distribution (default: no)
.RE
.PP
\fB\-exonlengthdistri\fR [\fIyes|no\fR]
.RS 4
show exon length distribution (default: no)
.RE
.PP
\fB\-exonnumberdistri\fR [\fIyes|no\fR]
.RS 4
show exon number distribution (default: no)
.RE
.PP
\fB\-intronlengthdistri\fR [\fIyes|no\fR]
.RS 4
show intron length distribution (default: no)
.RE
.PP
\fB\-cdslengthdistri\fR [\fIyes|no\fR]
.RS 4
show CDS length distribution (measured in amino acids) (default: no)
.RE
.PP
\fB\-source\fR [\fIyes|no\fR]
.RS 4
show the set of used source tags (column 2 in regular GFF3 lines) (default: no)
.RE
.PP
\fB\-addintrons\fR [\fIyes|no\fR]
.RS 4
add intron features between existing exon features (before computing stats) (default: no)
.RE
.PP
\fB\-v\fR [\fIyes|no\fR]
.RS 4
be verbose (default: no)
.RE
.PP
\fB\-o\fR [\fIfilename\fR]
.RS 4
redirect output to specified file (default: undefined)
.RE
.PP
\fB\-gzip\fR [\fIyes|no\fR]
.RS 4
write gzip compressed output file (default: no)
.RE
.PP
\fB\-bzip2\fR [\fIyes|no\fR]
.RS 4
write bzip2 compressed output file (default: no)
.RE
.PP
\fB\-force\fR [\fIyes|no\fR]
.RS 4
force writing to output file (default: no)
.RE
.PP
\fB\-help\fR
.RS 4
display help and exit
.RE
.PP
\fB\-version\fR
.RS 4
display version information and exit
.RE
.SH "REPORTING BUGS"
.sp
Report bugs to https://github\&.com/genometools/genometools/issues\&.