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FFINDEX_APPLY:(1) User Commands FFINDEX_APPLY:(1)

NAME

ffindex_apply: - apply a program to each FFindex entry

DESCRIPTION

ERROR Not enough arguments.

USAGE: ffindex_apply [-m] [-q] [-l LOG_FILE] -d DATA_FILENAME_OUT -i INDEX_FILENAME_OUT DATA_FILENAME INDEX_FILENAME -- PROGRAM [PROGRAM_ARGS]*

LOG_FILE like an FFindex file but with the return value of apply added. This file can be processed and used as FFindex file. E.g. grep " 1$" foo.log | cut -f 1-3 > foo-special.ffindex. where maybe the ffindex_apply ran with -- perl -e 'return 1 if(/^SPECIAL/)'
Do not merge the FFindex parts generated by the different MPI processes This is useful for large MPI Jobs where merge time might be accounted.
FFDATA output file, stdout of program will be captured
FFINDEX output file, entries get the same name as input entry

Designed and implemented by Andreas Hauser <andy@splashground.de>. debian/tmp/usr/bin/ffindex_apply: Invalid argument

EXCEPTION ffindex_apply_mpi in rank: 0

ERROR Not enough arguments.

USAGE: ffindex_apply [-m] [-q] [-l LOG_FILE] -d DATA_FILENAME_OUT -i INDEX_FILENAME_OUT DATA_FILENAME INDEX_FILENAME -- PROGRAM [PROGRAM_ARGS]*

LOG_FILE like an FFindex file but with the return value of apply added. This file can be processed and used as FFindex file. E.g. grep " 1$" foo.log | cut -f 1-3 > foo-special.ffindex. where maybe the ffindex_apply ran with -- perl -e 'return 1 if(/^SPECIAL/)'
Do not merge the FFindex parts generated by the different MPI processes This is useful for large MPI Jobs where merge time might be accounted.
FFDATA output file, stdout of program will be captured
FFINDEX output file, entries get the same name as input entry

Designed and implemented by Andreas Hauser <andy@splashground.de>. debian/tmp/usr/bin/ffindex_apply: Invalid argument

EXCEPTION ffindex_apply_mpi in rank: 0

BUGS

User feedback is welcome, especially bugs, performance issues and last but not least convenience of the programs and API.

Email Andreas Hauser hauser@genzentrum.lmu.de.

March 2024 ffindex_apply: invalid option -- 'v'