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FASTAQ-INTERLEAVE(1) User Commands FASTAQ-INTERLEAVE(1)

NAME

fastaq_interleave - Interleaves two files, output is alternating between fwd/rev reads

DESCRIPTION

usage: fastaq_interleave <infile_1> <infile_2> <outfile>

Interleaves two files, output is alternating between fwd/rev reads

positional arguments:

infile_1
Name of first input file
infile_2
Name of second input file
outfile
Name of output file of interleaved reads

optional arguments:

-h, --help
show this help message and exit
--suffix1 SUFFIX1
Suffix to add to all names from infile_1 (if suffix not already present)
--suffix2 SUFFIX2
Suffix to add to all names from infile_2 (if suffix not already present)
April 2020 fastaq 3.17.0