.\" Hey, EMACS: -*- nroff -*- .\" First parameter, NAME, should be all caps .\" Second parameter, SECTION, should be 1-8, maybe w/ subsection .\" other parameters are allowed: see man(7), man(1) .TH EXONERATE 1 "30 Jun 2007" .\" Please adjust this date whenever revising the manpage. .\" .\" Some roff macros, for reference: .\" .nh disable hyphenation .\" .hy enable hyphenation .\" .ad l left justify .\" .ad b justify to both left and right margins .\" .nf disable filling .\" .fi enable filling .\" .br insert line break .\" .sp insert n+1 empty lines .\" for manpage-specific macros, see man(7) .SH NAME exonerate \- suite for investigating DNA and RNA sequence similarities .SH SYNOPSIS .B exonerate-client .RI [ --help ] .br .B exonerate-server .RI [ --help ] .br .B fasta2esd .RI [ --help ] .br .B fastaannotatecdna .RI [ --help ] .br .B fastachecksum .RI [ --help ] .br .B fastaclean .RI [ --help ] .br .B fastaclip .RI [ --help ] .br .B fastacomposition .RI [ --help ] .br .B fastadiff .RI [ --help ] .br .B fastaexplode .RI [ --help ] .br .B fastafetch .RI [ --help ] .br .B fastahardmask .RI [ --help ] .br .B fastaindex .RI [ --help ] .br .B fastalength .RI [ --help ] .br .B fastanrdb .RI [ --help ] .br .B fastaoverlap .RI [ --help ] .br .B fastareformat .RI [ --help ] .br .B fastaremove .RI [ --help ] .br .B fastarevcomp .RI [ --help ] .br .B fastasoftmask .RI [ --help ] .br .B fastasort .RI [ --help ] .br .B fastasplit .RI [ --help ] .br .B fastasubseq .RI [ --help ] .br .B fastatranslate .RI [ --help ] .br .B fastavalidcds .RI [ --help ] .br .SH DESCRIPTION These programs are not described by the upstream author, however, some information is available via the --help and -h arguments for all these programs. Whoever is using any of these programs in routine, is requested to provide a seed of a respective man page to the upstream author. .PP .SH OPTIONS .TP .B \-h, .B \-\-help Show summary of options. .TP .B \-v, \-\-version Show version of program. .SH SEE ALSO .BR http://www.ebi.ac.uk/~guy/exonerate/ .br The author of this package provides a beginner ( .IR http://www.ebi.ac.uk/~guy/exonerate/beginner.html ) and and avanced .RI http://www.ebi.ac.uk/~guy/exonerate/advanced.html ) tutorial on his web pages. .SH AUTHOR exonerate was written by Guy Slater . .PP This manual page was written by Steffen Moeller for the Debian project (but may be used by others).