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CIF_CORRECT_TAGS(1) General Commands Manual CIF_CORRECT_TAGS(1)

NAME

cif_correct_tags - correct misspelt tags in a CIF file and output made changes into the standard I/O streams. By default, only tags from CIF Core and CIF COD dictionaries with extra '^_+' prefixes are corrected. Additionally, a replacement list file can be provided for the correction of misspelt tags.

SYNOPSIS

cif_correct_tags --options input.cif input*.cif

DESCRIPTION

Correct misspelt tags in a CIF file and output made changes into the standard I/O streams. By default, only tags from CIF Core and CIF COD dictionaries with extra '^_+' prefixes are corrected. Additionally, a replacement list file can be provided for the correction of misspelt tags.

OPTIONS

--keep-tag-order
Keep the original tag order in CIF file. Default.

--sort-tags
Reorder tags in CIF file according to COD.

-r, --replacement-list 'replacement-file.lst'
Name of the multi-line replacement list file with
entries of form '_incorrect_tag _correct_tag' to be
used in the correction of misspelt tags.

--cif-input
Use CIF format for input. Default.

--json-input
Use JSON format for input.

--cif-output
Use CIF format for output. Default.

--json-output
Use JSON format for output.

--cif
Use CIF format for both input and output. Default.

--json
Use JSON format for both input and output.

--use-perl-parser
Use Perl parser to parse CIF files.

--use-c-parser
Use C parser to parse CIF files. Default.

--help, --usage
Output a short usage message (this message) and exit.

--version
Output version information and exit.

REPORTING BUGS

Report cif_correct_tags bugs using e-mail: cod-bugs@ibt.lt