.TH CIF_AUTOMORPHISM 1
.SH NAME
cif_automorphism \- find automorphism orbits in CIF files.

.SH SYNOPSIS
cif_automorphism \-\-options input1.cif input*.cif

.SH DESCRIPTION
Find automorphism orbits in CIF files.

.SH OPTIONS
\-\-ignore\-hydrogens
                  Do not consider hydrogen atoms in automorphism
                  detection.

\-\-no\-ignore\-hydrogens
                  Take hydrogen atoms into consideration when searching
                  for automorphisms (default).


\-\-print\-atom\-site\-type\-symbol
                  Output assumed atom chemical types as values of
                  '_atom_site_type_symbol', if this data item is not
                  used.

\-\-no\-print\-atom\-site\-type\-symbol
                  Do not output assumed atom chemical types as values
                  of '_atom_site_type_symbol' (default).


\-\-use\-c\-parser
                  Use Perl & C parser for CIF parsing (default).

\-\-use\-perl\-parser
                  Use Perl parser for CIF parsing.


\-\-help, \-\-usage
                  Output a short usage message (this message) and exit.

\-\-version
                  Output version information and exit.

.SH "REPORTING BUGS"
Report cif_automorphism bugs using e\-mail: cod\-bugs@ibt.lt