Scroll to navigation

sequence(1) The Computational Morphometry Toolkit sequence(1)


sequence - Value sequence


Analyze sequence of numerical values, which is read from standard input


Global Toolkit Options (these are shared by all CMTK tools)

Write list of basic command line options to standard output.
Write complete list of basic and advanced command line options to standard output.
Write list of command line options to standard output in MediaWiki markup.
Write man page source in 'nroff' markup to standard output.
Write toolkit version to standard output.
Write the current command line to standard output.
Set verbosity level.
Increment verbosity level by 1 (deprecated; supported for backward compatibility).
Set maximum number of parallel threads (for POSIX threads and OpenMP).

Main Options

Maximum value threshold. All values above are ignored. [Default: disabled]
Use absolute values.

Histogram Options

Minimum of the histogram value range. All values below this will be counted in the first histogram bin. [Default: disabled]
Maximum of the histogram value range. All values above this will be counted in the last histogram bin. [Default: disabled]
Number of histogram bins. [Default: 1000]

Output Options

Output number format in printf() style. [Default: %.6f ]
Path for optional histogram output in comma-separated (CSV) format. [Default: NONE]


Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, Daniel B. Russakoff, and Yaroslav Halchenko



Report bugs at


CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium on Alcohol and Neurodevelopment in Adolescence (N-CANDA): Data Integration Component. From April 2009 through September 2011, CMTK development and maintenance was supported by the NIBIB under Grant EB008381.

Jul 7 2024 CMTK 3.3.1p2