table of contents
BP_PARSE_HMMSEARCH(1p) | User Contributed Perl Documentation | BP_PARSE_HMMSEARCH(1p) |
NAME¶
bp_parse_hmmsearch - parse single/multiple HMMSEARCH results
file(s) with
different output options
SYNOPSIS¶
bp_parse_hmmsearch [--po] [--ps] -s hmmsearch_file
bp_parse_hmmsearch [--po] [--ps] -m index_file
DESCRIPTION¶
Mandatory Options:¶
-s HMMSEARCH file to parse. -m INDEX file that contains a list of HMMSEARCH files for multiple parsing.
Special Options:¶
--po Print only the hits that have positive scores. --ps Print the total of positive scores found. --help Show this documentation.
FEEDBACK¶
Mailing Lists¶
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Reporting Bugs¶
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:
https://github.com/bioperl/bioperl-live/issues
AUTHOR¶
Mauricio Herrera Cuadra <mauricio at open-bio.org>
2018-10-27 | perl v5.26.2 |