.TH BPPALNOPTIM 1 LOCAL

.SH NAME

bppalnoptim - Sequence alignment optimization according to the number of sequences vs. number of sites trade-off

.SH SYNOPSIS

.B bppalnoptim [options]

.SH AVAILABILITY

All UNIX flavors

.SH DESCRIPTION

bppalnoptim samples sequences from an alignment in order to maximize the number of sites with a given minimal coverage.

.SH OPTIONS

You should refer to 'info physamp' or to the online manual of physamp for a complete list of available options.

.TP 5

--noninteractive=yes

generates output for redirection into a file.

.TP

param=file

reads a file for loading options

.SH AUTHOR

Julien Y. Dutheil.