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.\" ========================================================================
.\"
.IX Title "Bio::Map::LinkagePosition 3pm"
.TH Bio::Map::LinkagePosition 3pm "2018-10-27" "perl v5.26.2" "User Contributed Perl Documentation"
.\" For nroff, turn off justification.  Always turn off hyphenation; it makes
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.SH "NAME"
Bio::Map::LinkagePosition \- Create a Position for a Marker that will be placed
	                        on a Bio::Map::LinkageMap
.SH "SYNOPSIS"
.IX Header "SYNOPSIS"
.Vb 3
\&    use Bio::Map::Position;
\&    my $position = Bio::Map::LinkagePosition\->new(\-positions => 1,
\&                                                 \-distance => 22.1 );
\&
\&        # can get listing of positions
\&    my @positions = $position\->each_position;
.Ve
.SH "DESCRIPTION"
.IX Header "DESCRIPTION"
Position for a Bio::Map::MarkerI compliant object that will be
placed on a Bio::Map::LinkageMap. See Bio::Map::MarkerI and
Bio::Map::LinkageMap for details
.SH "FEEDBACK"
.IX Header "FEEDBACK"
.SS "Mailing Lists"
.IX Subsection "Mailing Lists"
User feedback is an integral part of the evolution of this and other
Bioperl modules. Send your comments and suggestions preferably to
the Bioperl mailing list.  Your participation is much appreciated.
.PP
.Vb 2
\&  bioperl\-l@bioperl.org                  \- General discussion
\&  http://bioperl.org/wiki/Mailing_lists  \- About the mailing lists
.Ve
.SS "Support"
.IX Subsection "Support"
Please direct usage questions or support issues to the mailing list:
.PP
\&\fIbioperl\-l@bioperl.org\fR
.PP
rather than to the module maintainer directly. Many experienced and 
reponsive experts will be able look at the problem and quickly 
address it. Please include a thorough description of the problem 
with code and data examples if at all possible.
.SS "Reporting Bugs"
.IX Subsection "Reporting Bugs"
Report bugs to the Bioperl bug tracking system to help us keep track
of the bugs and their resolution. Bug reports can be submitted via the
web:
.PP
.Vb 1
\&  https://github.com/bioperl/bioperl\-live/issues
.Ve
.SH "AUTHOR \- Chad Matsalla"
.IX Header "AUTHOR - Chad Matsalla"
Email bioinformatics1@dieselwurks.com
.SH "CONTRIBUTORS"
.IX Header "CONTRIBUTORS"
Lincoln Stein, lstein@cshl.org
Heikki Lehvaslaiho, heikki-at-bioperl-dot-org
Jason Stajich jason@bioperl.org
Sendu Bala bix@sendu.me.uk
.SH "APPENDIX"
.IX Header "APPENDIX"
The rest of the documentation details each of the object methods.
Internal methods are usually preceded with a _
.SS "new"
.IX Subsection "new"
.Vb 7
\& Title   : new
\& Usage   : my $obj = Bio::Map::LinkagePosition\->new(\-positions => $position,
\&                                                                   \-distance => $distance);
\& Function: Builds a new Bio::Map::LinkagePosition object
\& Returns : Bio::Map::LinkagePosition
\& Args    : \-order => the relative order of this marker on a linkage map
\&               \-positions => positions on a map
.Ve
.SS "Bio::Map::PositionI methods"
.IX Subsection "Bio::Map::PositionI methods"
.SS "order"
.IX Subsection "order"
.Vb 6
\& Title   : order
\& Usage   : $o_position\->order($order)
\&           my $order = $o_position\->order()
\& Function: get/set the order position of this position in a map
\& Returns : int
\& Args    : none to get, int to set
.Ve