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Bio::LiveSeq::ChainI(3pm) User Contributed Perl Documentation Bio::LiveSeq::ChainI(3pm)


Bio::LiveSeq::ChainI - Double linked chain data structure


  #documentation needed


This class generates and manipulates generic double linked list, chain, that can be used to manage biological sequences.

The advantages over strings or plain arrays is the ease of tracking changes (mutations) in the elements (sequence). The other side of the coin is that these structures need consideraly more memory, but that is cheap and constantly inceasing resource in computers.


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rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.

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AUTHOR - Joseph A.L. Insana



The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _


  Title   : new
  Usage   : $chain = Bio::LiveSeq::ChainI->new(-string => "thequickbrownfoxjumpsoverthelazydog",
                                             -offset => 3 );
         OR $chain = Bio::LiveSeq::ChainI->new(-array => \@array,
                                             -offset => 3 );
  Function: generates a new Bio::LiveSeq:ChainI
  Returns : a new Chain
  Args    : string
         OR arrayreference
        AND optional offset to create element labels
2018-10-27 perl v5.26.2