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.\" ========================================================================
.\"
.IX Title "Bio::DB::Expression::geo 3pm"
.TH Bio::DB::Expression::geo 3pm "2018-10-27" "perl v5.26.2" "User Contributed Perl Documentation"
.\" For nroff, turn off justification.  Always turn off hyphenation; it makes
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.SH "NAME"
Bio::DB::Expression::geo \- *** DESCRIPTION of Class
.SH "SYNOPSIS"
.IX Header "SYNOPSIS"
*** Give standard usage here
.SH "DESCRIPTION"
.IX Header "DESCRIPTION"
*** Describe the object here
.SH "FEEDBACK"
.IX Header "FEEDBACK"
.SS "Mailing Lists"
.IX Subsection "Mailing Lists"
User feedback is an integral part of the evolution of this and other
Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list.  Your participation is much appreciated.
.PP
.Vb 2
\&  bioperl\-l@bioperl.org                  \- General discussion
\&  http://bioperl.org/wiki/Mailing_lists  \- About the mailing lists
.Ve
.SS "Support"
.IX Subsection "Support"
Please direct usage questions or support issues to the mailing list:
.PP
\&\fIbioperl\-l@bioperl.org\fR
.PP
rather than to the module maintainer directly. Many experienced and 
reponsive experts will be able look at the problem and quickly 
address it. Please include a thorough description of the problem 
with code and data examples if at all possible.
.SS "Reporting Bugs"
.IX Subsection "Reporting Bugs"
Report bugs to the Bioperl bug tracking system to help us keep track
of the bugs and their resolution. Bug reports can be submitted via the
web:
.PP
.Vb 1
\&  https://github.com/bioperl/bioperl\-live/issues
.Ve
.SH "AUTHOR"
.IX Header "AUTHOR"
Allen Day <allenday@ucla.edu>
.SH "APPENDIX"
.IX Header "APPENDIX"
The rest of the documentation details each of the object methods.
Internal methods are usually preceded with a '_'.  Methods are
in alphabetical order for the most part.
.SS "\fI_initialize()\fP"
.IX Subsection "_initialize()"
.Vb 4
\& Usage   : $obj\->_initialize(%arg);
\& Function: Internal method to initialize a new Bio::DB::Expression::geo object
\& Returns : true on success
\& Args    : Arguments passed to new()
.Ve
.SS "\fIget_platforms()\fP"
.IX Subsection "get_platforms()"
.Vb 5
\& Usage   :
\& Function:
\& Example :
\& Returns : a list of Bio::Expression::Platform objects
\& Args    :
.Ve
.SS "\fIget_samples()\fP"
.IX Subsection "get_samples()"
.Vb 5
\& Usage   :
\& Function:
\& Example :
\& Returns : a list of Bio::Expression::Sample objects
\& Args    :
.Ve
.SS "\fIget_contacts()\fP"
.IX Subsection "get_contacts()"
.Vb 5
\& Usage   :
\& Function:
\& Example :
\& Returns : a list of Bio::Expression::Contact objects
\& Args    :
.Ve
.SS "\fIget_datasets()\fP"
.IX Subsection "get_datasets()"
.Vb 5
\& Usage   : $db\->get_datasets(\*(Aqaccession\*(Aq);
\& Function:
\& Example :
\& Returns : a list of Bio::Expression::DataSet objects
\& Args    :
.Ve
.SS "\fI_platforms_doc()\fP"
.IX Subsection "_platforms_doc()"
.Vb 5
\& Usage   :
\& Function:
\& Example :
\& Returns : an HTML document containing a table of all platforms
\& Args    :
.Ve