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Bio::DB::HTS::Kseq::Iterator(3pm) User Contributed Perl Documentation Bio::DB::HTS::Kseq::Iterator(3pm)


Copyright [2015-2018] EMBL-European Bioinformatics Institute

Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at

Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.


Bio::DB::HTS::Kseq::Iterator - The Kseq iterator


An object for iterating through the available records. Other methods are available but are undocumented because you should be using the "next_seq" methods as much as possible.


  my $iter = $kseq->iterator();
  while(my $r = $iter->next_seq()) {
    say $r->name;
    say $r->desc;
    say $r->seq;
    say $r->qual;


Returns a blessed "Bio::DB::HTS::Kseq::Record" instance.
Returns a raw HashRef with the keys name, desc, seq and qual available.
2022-02-05 perl v5.34.0