'\" t .\" Title: gt-shulengthdist .\" Author: [FIXME: author] [see http://www.docbook.org/tdg5/en/html/author] .\" Generator: DocBook XSL Stylesheets vsnapshot .\" Date: 10/25/2023 .\" Manual: GenomeTools Manual .\" Source: GenomeTools 1.6.5 .\" Language: English .\" .TH "GT\-SHULENGTHDIST" "1" "10/25/2023" "GenomeTools 1\&.6\&.5" "GenomeTools Manual" .\" ----------------------------------------------------------------- .\" * Define some portability stuff .\" ----------------------------------------------------------------- .\" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .\" http://bugs.debian.org/507673 .\" http://lists.gnu.org/archive/html/groff/2009-02/msg00013.html .\" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .ie \n(.g .ds Aq \(aq .el .ds Aq ' .\" ----------------------------------------------------------------- .\" * set default formatting .\" ----------------------------------------------------------------- .\" disable hyphenation .nh .\" disable justification (adjust text to left margin only) .ad l .\" ----------------------------------------------------------------- .\" * MAIN CONTENT STARTS HERE * .\" ----------------------------------------------------------------- .SH "NAME" gt-shulengthdist \- Compute distribution of pairwise shustring lengths\&. .SH "SYNOPSIS" .sp \fBgt shulengthdist\fR [options] \-ii indexname .SH "DESCRIPTION" .PP \fB\-ii\fR [\fIstring\fR] .RS 4 Specify input index (default: undefined) .RE .PP \fB\-scan\fR [\fIyes|no\fR] .RS 4 scan index rather than mapping it to main memory (default: no) .RE .PP \fB\-v\fR [\fIyes|no\fR] .RS 4 be verbose (default: no) .RE .PP \fB\-help\fR .RS 4 display help and exit .RE .PP \fB\-version\fR .RS 4 display version information and exit .RE .SH "REPORTING BUGS" .sp Report bugs to \&.