table of contents
GTHBSSMBUILD(1) | GTHBSSMBUILD(1) |
NAME¶
gthbssmbuild - build splice site model
SYNOPSIS¶
gthbssmbuild [option ...] genomic_file cDNA_file
DESCRIPTION¶
Build a BSSM file from a directory tree containing the training data.
OPTIONS¶
-bssmfile
specify name of BSSM file to store parameters in default:
undefined
-datapath
specify root of species-specific training data directory
tree default: undefined
-gtdonor
train GT donor model default: no
-gcdonor
train GC donor model default: no
-agacceptor
train AG acceptor model default: no
-gzip
use gzip’ed input files default: no
-help
display help and exit
-version
display version information and exit