|WATER(1e)||EMBOSS Manual for Debian||WATER(1e)|
NAME¶water - Smith-Waterman local alignment of sequences
water -asequence sequence -bsequence seqall [-datafile matrixf] -gapopen float -gapextend float -brief boolean -outfile align
DESCRIPTION¶water is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Alignment:Local" command group(s).
Input section¶-asequence sequence
Required section¶-gapopen float
Output section¶-brief boolean
BUGS¶Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).
SEE ALSO¶water is fully documented via the tfm(1) system.
AUTHOR¶Debian Med Packaging Team <email@example.com>
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.