.TH SINFO_REC_DETLIN "7" "2.9.0" "sinfo_rec_detlin" "sinfo recipes" .SH NAME sinfo_rec_detlin \- Detector's linearity & non linear bad pixels determination. .SH SYNOPSIS esorex .B sinfo_rec_detlin [OPTIONS] FILE.sof .SH DESCRIPTION This recipe computes detector non linearities and a bad pixel map. .PP The input files are increasing intensity raw flats their associated tags should be LINEARITY_LAMP. .PP The output are: A table (PRO.CATG=LIN_DET_INFO) with information on the detector non linearities A table (PRO.CATG=GAIN_INFO) with information on the detector gain A cube (PRO.CATG=BP_COEFF) with the polynomial fit parameters of the detector non linearities A bad pixel map (PRO.CATG=BP_MAP_NL) .SH OPTIONS .TP \fB\-\-gen\-overpar\fR \fI\fR Overwrite DRS ini parameters: (bool; default: True). The full name of this option for the EsoRex configuration file is \fBsinfoni.general.overwrite_parameters\fR [default = \fITrue\fR]. .TP \fB\-\-lc_sw\fR \fI\fR Correct for bad lines introduced by instrument software: (bool; default: False). The full name of this option for the EsoRex configuration file is \fBsinfoni.general.lc_sw\fR [default = \fIFalse\fR]. .TP \fB\-\-lc_kappa\fR \fI\fR Kappa sigma value (long; default: 18). The full name of this option for the EsoRex configuration file is \fBsinfoni.general.lc_kappa\fR [default = \fI18\fR]. .TP \fB\-\-lc_filt_rad\fR \fI\fR Filtering radii applied during median filter. Should be small (long; default: 3). The full name of this option for the EsoRex configuration file is \fBsinfoni.general.lc_filt_rad\fR [default = \fI3\fR]. .TP \fB\-\-product\-density\fR \fI\fR Density of pipeline products: 0 (low), 1 (low+skycor), 2 (med\-QC), 3 (high\-debug+skycor) (long; default: 2). The full name of this option for the EsoRex configuration file is \fBsinfoni.product.density\fR [default = \fI2\fR]. .TP \fB\-\-bp_lin\-order\fR \fI\fR Order: order of the fit polynomial = number of coefficents \- 1 (long; default: 2). The full name of this option for the EsoRex configuration file is \fBsinfoni.bp_lin.order\fR [default = \fI2\fR]. .TP \fB\-\-bp_lin\-thresh_sigma_fct\fR \fI\fR Threshold Sigma Factor: threshold factor of the clean standard deviation. If the deviations of the linear polynomial coefficients exceed this threshold the corresponding pixels are declared as bad (float; default: 10.0). The full name of this option for the EsoRex configuration file is \fBsinfoni.bp_lin.thresh_sigma_factor\fR [default = \fI10.0\fR]. .TP \fB\-\-bp_lin\-nlin_threshold\fR \fI\fR Non Linear Threshold (float; default: 0.5). The full name of this option for the EsoRex configuration file is \fBsinfoni.bp_lin.nlin_threshold\fR [default = \fI0.5\fR]. .TP \fB\-\-bp_lin\-lo_rej\fR \fI\fR low_rejection: percentage of rejected low intensity pixels before averaging (float; default: 10.0). The full name of this option for the EsoRex configuration file is \fBsinfoni.bp_lin.low_rejection\fR [default = \fI10.0\fR]. .TP \fB\-\-bp_lin\-hi_rej\fR \fI\fR high_rejection: percentage of rejected high intensity pixels before averaging (float; default: 10.0). The full name of this option for the EsoRex configuration file is \fBsinfoni.bp_lin.high_rejection\fR [default = \fI10.0\fR]. .PP Note that it is possible to create a configuration file containing these options, along with suitable default values. Please refer to the details provided by the 'esorex \-\-help' command. .SH SEE ALSO The full documentation for the sinfo pipeline can be downloaded as a PDF file using the following URL: .IP .B ftp://ftp.eso.org/pub/dfs/pipelines/sinfoni/sinfo\-pipeline\-manual\-19.0.pdf .PP An overview over the existing ESO pipelines can be found on the web page \fBhttp://www.eso.org/sci/software/pipelines/\fR. .PP Basic documentation about the EsoRex program can be found at the esorex (1) man page. .PP It is possible to call the pipelines from python using the python\-cpl package. See \fBhttp://packages.python.org/python\-cpl/index.html\fR for further information. .PP The other recipes of the sinfo pipeline are .IR sinfo_rec_distortion (7), .IR sinfo_rec_jitter (7), .IR sinfo_rec_mdark (7), .IR sinfo_rec_mflat (7), .IR sinfo_rec_pupil (7), .IR sinfo_rec_wavecal (7), .IR sinfo_utl_bp_mask_add (7), .IR sinfo_utl_cube2ima (7), .IR sinfo_utl_cube2spectrum (7), .IR sinfo_utl_cube_arith (7), .IR sinfo_utl_cube_combine (7), .IR sinfo_utl_cube_create (7), .IR sinfo_utl_ima_arith (7), .IR sinfo_utl_ima_line_corr (7), .IR sinfo_utl_line_oh_select (7), .IR sinfo_utl_skycor (7), .IR sinfo_utl_skymap (7), .IR sinfo_utl_spectrum_divide_by_blackbody (7), .IR sinfo_utl_spectrum_wavelength_shift (7) .SH VERSION sinfo_rec_detlin 2.9.0 .SH AUTHOR Andrea Modigliani .SH BUG REPORTS Please report any problems to Andrea.Modigliani@eso.org. Alternatively, you may send a report to the ESO User Support Department . .SH LICENSE This file is part of the SINFONI Instrument Pipeline Copyright (C) 2002,2003 European Southern Observatory This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111\-1307 USA