.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.3.
.TH BUSTOOLS "1" "January 2024" "bustools 0.43.2" "User Commands"
.SH NAME
bustools \- manual page for bustools 0.43.2
.SH SYNOPSIS
.B bustools
\fI\,<CMD> \/\fR[\fI\,arguments\/\fR] ..
.SH DESCRIPTION
bustools 0.43.2
.PP
Where <CMD> can be one of:
.PP
sort            Sort a BUS file by barcodes and UMIs
correct         Error correct a BUS file
umicorrect      Error correct the UMIs in a BUS file
count           Generate count matrices from a BUS file
inspect         Produce a report summarizing a BUS file
allowlist       Generate an on\-list from a BUS file
capture         Capture records from a BUS file
text            Convert a binary BUS file to a tab\-delimited text file
fromtext        Convert a tab\-delimited text file to a binary BUS file
extract         Extract FASTQ reads correspnding to reads in BUS file
compress        Compress a BUS file
decompress      Decompress a BUSZ (compressed BUS) file
version         Prints version number
cite            Prints citation information
.PP
Running bustools <CMD> without arguments prints usage information for <CMD>
.PP
Usage: bustools <CMD> [arguments] ..
.PP
Where <CMD> can be one of:
.PP
sort            Sort a BUS file by barcodes and UMIs
correct         Error correct a BUS file
umicorrect      Error correct the UMIs in a BUS file
count           Generate count matrices from a BUS file
inspect         Produce a report summarizing a BUS file
allowlist       Generate an on\-list from a BUS file
capture         Capture records from a BUS file
text            Convert a binary BUS file to a tab\-delimited text file
fromtext        Convert a tab\-delimited text file to a binary BUS file
extract         Extract FASTQ reads correspnding to reads in BUS file
compress        Compress a BUS file
decompress      Decompress a BUSZ (compressed BUS) file
version         Prints version number
cite            Prints citation information
.PP
Running bustools <CMD> without arguments prints usage information for <CMD>
.SH "SEE ALSO"
The full documentation for
.B bustools
is maintained as a Texinfo manual.  If the
.B info
and
.B bustools
programs are properly installed at your site, the command
.IP
.B info bustools
.PP
should give you access to the complete manual.