.TH mia\-2dmyoseries\-dice 1 "v2.4.3"  "USER COMMANDS"
.SH NAME
mia\-2dmyoseries\-dice \- Evaluate the dice index between segmentations.
.SH SYNOPSIS
.B  mia\-2dmyoseries\-dice \-i <input> [options]
.SH DESCRIPTION
.B mia\-2dmyoseries\-dice
This program is used to evaluate the per-frame dice index of segmented regions of an image with respect to the segmentation of a reference frame from the same series.
.SH OPTIONS
.RS
.IP "\-i \-\-input=(input, required); string"
original segmentation set 
.IP "\-k \-\-skip=2"
images to skip atthe bgin of the seriesimages to skip atthe bgin of the series 
.IP "\-r \-\-reference=20"
reference imagereference image 
.RE
.SS Help & Info
.RS
.IP "\-V \-\-verbose=warning"
verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are: 
.RS 10
.I
info
\(hy Low level messages
.RE
.RS 10
.I
trace
\(hy Function call trace
.RE
.RS 10
.I
fail
\(hy Report test failures
.RE
.RS 10
.I
warning
\(hy Warnings
.RE
.RS 10
.I
error
\(hy Report errors
.RE
.RS 10
.I
debug
\(hy Debug output
.RE
.RS 10
.I
message
\(hy Normal messages
.RE
.RS 10
.I
fatal
\(hy Report only fatal errors
.RE
.IP "   \-\-copyright"
print copyright information 
.IP "\-h \-\-help"
print this help 
.IP "\-? \-\-usage"
print a short help 
.IP "   \-\-version"
print the version number and exit 
.RE
.SS Processing
.RS
.IP "   \-\-threads=\-1"
Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (\-1: automatic estimation).Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (\-1: automatic estimation). 
.RE
.SH EXAMPLE
Evaluate the dice index of segmentation set segment.set with reference 30 and skipping the first two frames.
.HP
mia\-2dmyoseries\-dice \-i segment.set \-r 30 \-k 2
.SH AUTHOR(s)
Gert Wollny
.SH COPYRIGHT
This software is Copyright (c) 1999\(hy2015 Leipzig, Germany and Madrid, Spain.
It comes  with  ABSOLUTELY  NO WARRANTY  and  you  may redistribute it under the terms of the GNU 
GENERAL PUBLIC LICENSE Version 3 (or later). For more 
information run the program with the option '\-\-copyright'.