'\" t
.\" Title: gt-seqorder
.\" Author: [FIXME: author] [see http://docbook.sf.net/el/author]
.\" Generator: DocBook XSL Stylesheets v1.79.1
.\" Date: 01/06/2017
.\" Manual: GenomeTools Manual
.\" Source: GenomeTools 1.5.9
.\" Language: English
.\"
.TH "GT\-SEQORDER" "1" "01/06/2017" "GenomeTools 1\&.5\&.9" "GenomeTools Manual"
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.SH "NAME"
gt-seqorder \- Output sequences as MultiFasta in specified order\&.
.SH "SYNOPSIS"
.sp
\fBgt seqorder\fR (\-invert|\-sort|\-revsort|\-shuffle|\-sorthdr|\-sorthdrnum) encseq
.SH "DESCRIPTION"
.PP
\fB\-invert\fR [\fIyes|no\fR]
.RS 4
invert order of sequences (default: no)
.RE
.PP
\fB\-sort\fR [\fIyes|no\fR]
.RS 4
sort sequences lexicographically (by actual sequence) (default: no)
.RE
.PP
\fB\-revsort\fR [\fIyes|no\fR]
.RS 4
sort sequences in reverse lexicographic order (default: no)
.RE
.PP
\fB\-sorthdr\fR [\fIyes|no\fR]
.RS 4
sort sequences lexicographically by sequence header (default: no)
.RE
.PP
\fB\-sorthdrnum\fR [\fIyes|no\fR]
.RS 4
sort sequences numerically by sequence header (default: no)
.RE
.PP
\fB\-shuffle\fR [\fIyes|no\fR]
.RS 4
shuffle sequences pseudo\-randomly (default: no)
.RE
.PP
\fB\-help\fR
.RS 4
display help and exit
.RE
.PP
\fB\-version\fR
.RS 4
display version information and exit
.RE
.SH "REPORTING BUGS"
.sp
Report bugs to \&.