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GT-READJOINER(1) GenomeTools Manual GT-READJOINER(1)

NAME

gt-readjoiner - Readjoiner: a string graph-based sequence assembler.

SYNOPSIS

gt readjoiner [option ...] tool [argument ...]

DESCRIPTION

-help
display help and exit

-version

display version information and exit

Please consult the Readjoiner manual for more information.

Tools:

•prefilter prepare the readset for Readjoiner

•overlap calculate suffix-prefix matches

•assembly construct string graph and output contigs

REPORTING BUGS

Report bugs to <gt-users@genometools.org>.
01/06/2017 GenomeTools 1.5.9