table of contents
GT-FEATUREINDEX(1) | GenomeTools Manual | GT-FEATUREINDEX(1) |
NAME¶
gt-featureindex - Retrieve annotations from a persistent feature index as GFF3 output.SYNOPSIS¶
gt featureindex [option ...] indexfilenameDESCRIPTION¶
-range [start end]range constraint for index query (default:
undefined)
-seqid [string]
sequence region (default: undefined)
-retain [yes|no]
retain attributes (default: yes)
-backend [...]
database backend to use choose from [sqlite] (default:
sqlite)
-filename [string]
filename for feature database (sqlite backend only)
(default: undefined)
-v [yes|no]
be verbose (default: no)
-help
display help and exit
-version
display version information and exit
REPORTING BUGS¶
Report bugs to <gt-users@genometools.org>.01/06/2017 | GenomeTools 1.5.9 |