table of contents
GT-ENCSEQ-INFO(1) | GenomeTools Manual | GT-ENCSEQ-INFO(1) |
NAME¶
gt-encseq-info - Display meta-information about an encoded sequence.SYNOPSIS¶
gt encseq info [option ...] indexnameDESCRIPTION¶
-nomap [yes|no]do not map encoded sequence (gives less information)
(default: no)
-mirrored [yes|no]
use mirrored encoded sequence (DNA only) (default:
no)
-noindexname [yes|no]
do not output index name (default: no)
-show_alphabet [yes|no]
output alphabet definition (default: no)
-n50 [yes|no]
show N50 values (minimum length of largest sequences for
covering at least 50% of total sequence length) (default: no)
-o [filename]
redirect output to specified file (default:
undefined)
-gzip [yes|no]
write gzip compressed output file (default: no)
-bzip2 [yes|no]
write bzip2 compressed output file (default: no)
-force [yes|no]
force writing to output file (default: no)
-help
display help and exit
-version
display version information and exit
REPORTING BUGS¶
Report bugs to <gt-users@genometools.org>.01/06/2017 | GenomeTools 1.5.9 |