ONTOTEXT(1e) | EMBOSS Manual for Debian | ONTOTEXT(1e) |
NAME¶
ontotext - Get ontology term(s) original full textSYNOPSIS¶
ontotext -oboterms obo [-subclasses boolean] [-obsolete boolean] -outfile outfile
ontotext -help
DESCRIPTION¶
ontotext is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Ontology,Data retrieval:Ontology data,Data retrieval:Text data" command group(s).OPTIONS¶
Input section¶
-oboterms oboAdditional section¶
-subclasses booleanExtend the query matches to include all terms which are
specialisations (sub-classes) of the matched terms. Default value: N
-obsolete boolean
The default behaviour is to not use or return obsolete
terms. This option if set will include all terms. Default value: N
Advanced section¶
Output section¶
-outfile outfileBUGS¶
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).SEE ALSO¶
ontotext is fully documented via the tfm(1) system.AUTHOR¶
Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>Wrote the script used to autogenerate this manual
page.
COPYRIGHT¶
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.
05/11/2012 | EMBOSS 6.4.0 |