NAME¶

SYNOPSIS¶

DESCRIPTION¶

OPTIONS¶

--lambdamin <float>

Cut off the data below this wavelength after loading the pixel table(s). (float; default: 4000.0). The full name of this option for the EsoRex configuration file is muse.muse_scipost_make_cube.lambdamin [default = 4000.0].

--lambdamax <float>

Cut off the data above this wavelength after loading the pixel table(s). (float; default: 10000.0). The full name of this option for the EsoRex configuration file is muse.muse_scipost_make_cube.lambdamax [default = 10000.0].

--resample <str>

The resampling technique to use for the final output cube. (str; default: ´drizzle´). The full name of this option for the EsoRex configuration file is muse.muse_scipost_make_cube.resample [default = drizzle].

--dx <float>

Horizontal step size for resampling (in arcsec or pixel). The following defaults are taken when this value is set to 0.0: 0.2´´ for WFM, 0.075´´ for NFM, 1.0 if data is in pixel units. (float; default: 0.0). The full name of this option for the EsoRex configuration file is muse.muse_scipost_make_cube.dx [default = 0.0].

--dy <float>

Vertical step size for resampling (in arcsec or pixel). The following defaults are taken when this value is set to 0.0: 0.2´´ for WFM, 0.075´´ for NFM, 1.0 if data is in pixel units. (float; default: 0.0). The full name of this option for the EsoRex configuration file is muse.muse_scipost_make_cube.dy [default = 0.0].

--dlambda <float>

Wavelength step size (in Angstrom). Natural instrument sampling is used, if this is 0.0 (float; default: 0.0). The full name of this option for the EsoRex configuration file is muse.muse_scipost_make_cube.dlambda [default = 0.0].

--crtype <str>

Type of statistics used for detection of cosmic rays during final resampling. "iraf" uses the variance information, "mean" uses standard (mean/stdev) statistics, "median" uses median and the median median of the absolute median deviation. (str; default: ´median´). The full name of this option for the EsoRex configuration file is muse.muse_scipost_make_cube.crtype [default = median].

--crsigma <float>

Sigma rejection factor to use for cosmic ray rejection during final resampling. A zero or negative value switches cosmic ray rejection off. (float; default: 15.0). The full name of this option for the EsoRex configuration file is muse.muse_scipost_make_cube.crsigma [default = 15.0].

--rc <float>

Critical radius for the "renka" resampling method. (float; default: 1.25). The full name of this option for the EsoRex configuration file is muse.muse_scipost_make_cube.rc [default = 1.25].

--pixfrac <float>

Pixel down-scaling factor for the "drizzle" resampling method. (float; default: 0.8). The full name of this option for the EsoRex configuration file is muse.muse_scipost_make_cube.pixfrac [default = 0.8].

--ld <long>

Number of adjacent pixels to take into account during resampling in all three directions (loop distance); this affects all resampling methods except "nearest". (long; default: 1). The full name of this option for the EsoRex configuration file is muse.muse_scipost_make_cube.ld [default = 1].

--format <str>

Type of output file format, "Cube" is a standard FITS cube with NAXIS=3 and multiple extensions (for data and variance). The extended "x" formats include the reconstructed image(s) in FITS image extensions within the same file. (str; default: ´Cube´). The full name of this option for the EsoRex configuration file is muse.muse_scipost_make_cube.format [default = Cube].

--stacked <bool>

If true, write an additional output file in form of a 2D stacked image (x direction is pseudo-spatial, y direction is wavelength). (bool; default: False). The full name of this option for the EsoRex configuration file is muse.muse_scipost_make_cube.stacked [default = False].

--filter <str>

The filter name(s) to be used for the output field-of-view image. Each name has to correspond to an EXTNAME in an extension of the FILTER_LIST file. If an unsupported filter name is given, creation of the respective image is omitted. If multiple filter names are given, they have to be comma separated. (str; default: ´white´). The full name of this option for the EsoRex configuration file is muse.muse_scipost_make_cube.filter [default = white].

Note that it is possible to create a configuration file containing these options, along with suitable default values. Please refer to the details provided by the 'esorex --help' command.

SEE ALSO¶

ftp://ftp.eso.org/pub/dfs/pipelines/muse/muse-pipeline-cookbook-1.6.2.pdf

An overview over the existing ESO pipelines can be found on the web page http://www.eso.org/sci/software/pipelines/.

Basic documentation about the EsoRex program can be found at the esorex (1) man page.

It is possible to call the pipelines from python using the python-cpl package. See http://packages.python.org/python-cpl/index.html for further information.

The other recipes of the muse pipeline are muse_ampl(7), muse_astrometry(7), muse_bias(7), muse_create_sky(7), muse_dark(7), muse_exp_align(7), muse_exp_combine(7), muse_flat(7), muse_geometry(7), muse_lingain(7), muse_lsf(7), muse_qi_mask(7), muse_scibasic(7), muse_scipost(7), muse_scipost_apply_astrometry(7), muse_scipost_calibrate_flux(7), muse_scipost_combine_pixtables(7), muse_scipost_correct_dar(7), muse_scipost_correct_rv(7), muse_scipost_subtract_sky(7), muse_scipost_subtract_sky_simple(7), muse_standard(7), muse_twilight(7), muse_wavecal(7)

VERSION¶

AUTHOR¶

BUG REPORTS¶

LICENSE¶

This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02111-1307 USA