NAME¶
bp_tree2pag - convert Bio::TreeIO parseable format trees to pagel format
SYNOPSIS¶
bp_tree2pag -if nexus -i file.nexus > file.pag
# OR pipe in through STDIN, and use newick format instead
cat file.newick | bp_tree2pag -if newick > file.nh
# OR specify an output and input
bp_tree2pag -o file.pag -i file.newick
DESCRIPTION¶
Convert TreeIO parseable files into Pagel format tree files. Be warned that
pagel format only really supports a single tree per file so. Also Pagel
parsing is not yet available in bioperl.
