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BP_RUN_NEIGHBOR(1p) | User Contributed Perl Documentation | BP_RUN_NEIGHBOR(1p) |
NAME¶
run_neighbor - run Phylip's 'neighbor' program through BioperlSYNOPSIS¶
run_neighbor [-i inputfile] [-o outfilename]DESCRIPTION¶
Provide an matrix file to run neighbor on. File should be named of the forma file.matrix or file.protdist (the ending doesn't matter, but the program expects a file in the form of (\S+)\.(\S+).This will run the application 'neighbor' to build a Neighbor-Joining tree from a protein distance matrix.
AUTHOR¶
Jason Stajich, jason-AT-open-bio-DOT-org2017-01-13 | perl v5.24.1 |