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PMRNA(1) |
User Commands |
PMRNA(1) |
NAME¶
pmrna - filter out all but the primary isoform from each gene of the input
SYNOPSIS¶
pmrna [options] < annot.gff3 > new.gff3
DESCRIPTION¶
Options:
- -h|--help
- print this help message and exit
- -i|--introns
- flag indicating that introns are declared explicitly and do not need to be
inferred from exon features; default is to infer introns
- -l|--locus
- report a single representative mRNA for each locus instead of each
gene
- -m|--map: FILE
- write each gene/mRNA mapping to the specified file
- -p|--pseudogenes
- disable pseudogene detection and correction