other versions
- stretch 3.8.0+dfsg-1
- testing 3.12.0+dfsg-2
- stretch-backports 3.12.0+dfsg-2~bpo9+1
- unstable 3.12.0+dfsg-3
Bio::Roary::External::Blastp(3pm) | User Contributed Perl Documentation | Bio::Roary::External::Blastp(3pm) |
NAME¶
Bio::Roary::External::Blastp - Wrapper around NCBIs blastp commandVERSION¶
version 3.12.0SYNOPSIS¶
Wrapper around NCBIs blastp commanduse Bio::Roary::External::Blastp; my $blast_database= Bio::Roary::External::Blastp->new( fasta_file => 'contigs.fa', blast_database => 'db', exec => 'blastp', output_file => 'results.out' ); $blast_database->run();
METHODS¶
result_file¶
Returns the path to the results fileAUTHOR¶
Andrew J. Page <ap13@sanger.ac.uk>COPYRIGHT AND LICENSE¶
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
2019-01-31 | perl v5.24.1 |