.\" Automatically generated by Pod::Man 4.07 (Pod::Simple 3.32) .\" .\" Standard preamble: .\" ======================================================================== .de Sp \" Vertical space (when we can't use .PP) .if t .sp .5v .if n .sp .. .de Vb \" Begin verbatim text .ft CW .nf .ne \\$1 .. .de Ve \" End verbatim text .ft R .fi .. .\" Set up some character translations and predefined strings. \*(-- will .\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left .\" double quote, and \*(R" will give a right double quote. \*(C+ will .\" give a nicer C++. Capital omega is used to do unbreakable dashes and .\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, .\" nothing in troff, for use with C<>. .tr \(*W- .ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' .ie n \{\ . ds -- \(*W- . ds PI pi . if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch . if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch . ds L" "" . ds R" "" . ds C` "" . ds C' "" 'br\} .el\{\ . ds -- \|\(em\| . ds PI \(*p . ds L" `` . ds R" '' . ds C` . ds C' 'br\} .\" .\" Escape single quotes in literal strings from groff's Unicode transform. .ie \n(.g .ds Aq \(aq .el .ds Aq ' .\" .\" If the F register is >0, we'll generate index entries on stderr for .\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index .\" entries marked with X<> in POD. Of course, you'll have to process the .\" output yourself in some meaningful fashion. .\" .\" Avoid warning from groff about undefined register 'F'. .de IX .. .if !\nF .nr F 0 .if \nF>0 \{\ . de IX . tm Index:\\$1\t\\n%\t"\\$2" .. . if !\nF==2 \{\ . nr % 0 . nr F 2 . \} .\} .\" ======================================================================== .\" .IX Title "Bio::Tools::PSort::Module::AnalysisI 3pm" .TH Bio::Tools::PSort::Module::AnalysisI 3pm "2018-10-22" "perl v5.24.1" "User Contributed Perl Documentation" .\" For nroff, turn off justification. Always turn off hyphenation; it makes .\" way too many mistakes in technical documents. .if n .ad l .nh .SH "NAME" .SH "SYNOPSIS" .IX Header "SYNOPSIS" .SH "DESCRIPTION" .IX Header "DESCRIPTION" .SH "METHODS" .IX Header "METHODS" .SH "SEE ALSO" .IX Header "SEE ALSO" .SH "AUTHOR" .IX Header "AUTHOR" .Vb 2 \& Fiona Brinkman, Cory Spencer \& Brinkman Laboratory, Simon Fraser University, BC, CANADA .Ve .SH "OVERVIEW" .IX Header "OVERVIEW" PSORT-B is described in Gardy, J.L. et al (2003). PSORT-B: improving protein subcellular localization prediction for Gram-negative bacteria. Nuc Acids Res 31(13):3613\-17. Please cite this publication if you use PSORT-B in your research. .PP The standalone version of PSORT-B is distributed under the \s-1GNU \s0 General Public Licence (Gnu \s-1GPL\s0) (see the \s-1LICENSE\s0 file included in the download) by the Brinkman Laboratory, Simon Fraser University, Burnaby, B.C., Canada. .PP This standalone version of PSORT-B has initially been developed for the Linux environment. .PP This document describes the installation of the PSORT-B version 1.1.4 command line program and the PSORT-B server packages. For most purposes, following the installation instructions for the command line version will be sufficient. .PP For further information, please contact psort\-mail@sfu.ca. .SH "LICENSE" .IX Header "LICENSE" This program is free software; you can redistribute it and/or modify it under the terms of the \s-1GNU\s0 General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. .PP This program is distributed in the hope that it will be useful, but \s-1WITHOUT ANY WARRANTY\s0; without even the implied warranty of \&\s-1MERCHANTABILITY\s0 or \s-1FITNESS FOR A PARTICULAR PURPOSE. \s0 See the \&\s-1GNU\s0 General Public License for more details. .PP You should have received a copy of the \s-1GNU\s0 General Public License along with this program; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, \s-1MA 02111\-1307 USA\s0