.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.47.4.
.TH TRADIS_PLOT "1" "March 2017" "tradis_plot 1.3.1" "User Commands"
.SH NAME
tradis_plot \- bio-tradis: create insertion site plot for Artemis
.SH SYNOPSIS
.B tradis_plot
\fI\,-f file.bam \/\fR[\fI\,options\/\fR]
.SH DESCRIPTION
Create insertion site plot for Artemis
.SH OPTIONS
.TP
\fB\-f\fR
mapped, sorted bam file
.TP
\fB\-m\fR
mapping quality must be greater than X (optional. default: 30)
.TP
\fB\-o\fR
output base name for plot (optional. default: tradis.plot)
.SH AUTHOR
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.