.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.40.4.
.TH VCF-CONVERT "1" "July 2011" "vcf-convert 0.1.5" "User Commands"
.SH NAME
vcf-convert \- convert between VCF versions
.SH SYNOPSIS
.B cat
\fIin.vcf | vcf-convert \fR[\fIOPTIONS\fR] \fI> out.vcf\fR
.SH DESCRIPTION
About: Convert between VCF versions, currently to VCFv4.0 only.
.SH OPTIONS
.TP
\fB\-r\fR, \fB\-\-refseq\fR <file>
The reference sequence in samtools faindexed fasta file. (Not required with SNPs only.)
.TP
\fB\-v\fR, \fB\-\-version\fR <string>
4.0
.TP
\fB\-h\fR, \-?, \fB\-\-help\fR
This help message.