.TH gmx-wheel 1 "" "VERSION 5.0.2" "GROMACS Manual" .SH NAME gmx-wheel \- Plot helical wheels .SH SYNOPSIS gmx wheel [\-f [<.dat>]] [\-o [<.eps>]] [\-nice ] [\-r0 ] [\-rot0 ] [\-T ] [\-[no]nn] .SH DESCRIPTION \fBgmx wheel\fR plots a helical wheel representation of your sequence. The input sequence is in the \fB.dat\fR file where the first line contains the number of residues and each consecutive line contains a residue name. .SH OPTIONS Options to specify input and output files: .BI "\-f" " [<.dat>] (nnnice.dat) (Input)" Generic data file .BI "\-o" " [<.eps>] (plot.eps) (Output)" Encapsulated PostScript (tm) file Other options: .BI "\-nice" " (19)" Set the nicelevel .BI "\-r0" " (1)" The first residue number in the sequence .BI "\-rot0" " (0)" Rotate around an angle initially (90 degrees makes sense) .BI "\-T" " " Plot a title in the center of the wheel (must be shorter than 10 characters, or it will overwrite the wheel) .BI "\-[no]nn" " (yes)" Toggle numbers .SH SEE ALSO .BR gromacs(7) More information about \fBGROMACS\fR is available at <\fIhttp://www.gromacs.org/\fR>.