'\" t .\" Title: gt-seqtranslate .\" Author: [FIXME: author] [see http://docbook.sf.net/el/author] .\" Generator: DocBook XSL Stylesheets v1.78.1 .\" Date: 09/05/2014 .\" Manual: GenomeTools Manual .\" Source: GenomeTools 1.5.3 .\" Language: English .\" .TH "GT\-SEQTRANSLATE" "1" "09/05/2014" "GenomeTools 1\&.5\&.3" "GenomeTools Manual" .\" ----------------------------------------------------------------- .\" * Define some portability stuff .\" ----------------------------------------------------------------- .\" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .\" http://bugs.debian.org/507673 .\" http://lists.gnu.org/archive/html/groff/2009-02/msg00013.html .\" ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .ie \n(.g .ds Aq \(aq .el .ds Aq ' .\" ----------------------------------------------------------------- .\" * set default formatting .\" ----------------------------------------------------------------- .\" disable hyphenation .nh .\" disable justification (adjust text to left margin only) .ad l .\" ----------------------------------------------------------------- .\" * MAIN CONTENT STARTS HERE * .\" ----------------------------------------------------------------- .SH "NAME" gt-seqtranslate \- Translates a nucleotide sequence into a protein sequence\&. .SH "SYNOPSIS" .sp \fBgt seqtranslate\fR [option \&...] [files] .SH "DESCRIPTION" .PP \fB\-reverse\fR [\fIyes|no\fR] .RS 4 also translate reverse complements (default: yes) .RE .PP \fB\-fastawidth\fR [\fIvalue\fR] .RS 4 width of the FASTA output (default: 60) .RE .PP \fB\-o\fR [\fIfilename\fR] .RS 4 redirect output to specified file (default: undefined) .RE .PP \fB\-gzip\fR [\fIyes|no\fR] .RS 4 write gzip compressed output file (default: no) .RE .PP \fB\-bzip2\fR [\fIyes|no\fR] .RS 4 write bzip2 compressed output file (default: no) .RE .PP \fB\-force\fR [\fIyes|no\fR] .RS 4 force writing to output file (default: no) .RE .PP \fB\-help\fR .RS 4 display help and exit .RE .PP \fB\-version\fR .RS 4 display version information and exit .RE .SH "REPORTING BUGS" .sp Report bugs to \&.