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GT-SEQTRANSFORM(1) GenomeTools Manual GT-SEQTRANSFORM(1)

NAME

gt-seqtransform - Perform simple transformations on the given sequence file(s).

SYNOPSIS

gt seqtransform [option ...] [sequence_file ...]

DESCRIPTION

-addstopaminos [yes|no]
append stop amino acids (*) to given protein sequences, if not already present (default: no)
-width [value]
set output width for FASTA sequence printing (0 disables formatting) (default: 0)
-o [filename]
redirect output to specified file (default: undefined)
-gzip [yes|no]
write gzip compressed output file (default: no)
-bzip2 [yes|no]
write bzip2 compressed output file (default: no)
-force [yes|no]
force writing to output file (default: no)
-help
display help and exit
-version
display version information and exit

REPORTING BUGS

Report bugs to <gt-users@genometools.org>.
09/05/2014 GenomeTools 1.5.3