NAME¶
lodscore - compares likelihoods at locally optimal theta
SYNOPSIS¶
lodscore [
options]
ipedfile.dat pedfile.dat
DESCRIPTION¶
This manual page documents briefly the
lodscore command. In fact this is
a very raw intend to provide a manpage because the Debian GNU/Linux
distribution requires each program to have a manpage. Any enhancement would be
greatly apreciated.
lodscore is part of the
fastlink software package.
Lodscore compares -2log(likelihood) at the locally optimal theta to
-2log(likelihood) at a theta that is 1/2 in every component (i.e. each locus
unlinked to all the rest). In LINKAGE ILINK more likelihood function
evaluations are done after the last printed iteration line, but these
likelihood function evaluations are unnecessary (see paper2.ps from the
fastlink-doc Debian package for more details).
OPTIONS¶
There might be options but I did not found any information about them. Please
foreward any information about them to <tille@debian.org>
SEE ALSO¶
ilink(1),
linkmap(1),
mlink(1),
unknown(1).
Word-Wide-Web:¶
http://www.ncbi.nlm.nih.gov/CBBResearch/Schaffer/fastlink.html
AUTHOR:¶
Alejandro Schaeffer <schaffer@helix.nih.gov> and others
This manual page was written by Andreas Tille <tille@debian.org>, for the
Debian GNU/Linux system (but may be used by others).