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- jessie 1.5.0-1
FASTAQ_MAKE_RANDOM_CONTIGS(1) | Fastaq executables | FASTAQ_MAKE_RANDOM_CONTIGS(1) |
NAME¶
fastaq_make_random_contigsDESCRIPTION¶
fastaq_make_random_contigs [options] <number of sequences> <length of each sequence> <fasta out> Makes a multi-fasta file of random sequences, all of the same length. Each base has equal chance of being A,C,G or T
positional arguments:¶
- contigs
- Nunber of contigs to make
- length
- Length of each contig
- outfile
- Name of output file
optional arguments:¶
- -h, --help
- show this help message and exit
- --first_number FIRST_NUMBER
- If numbering the sequences, the first sequence gets this number [1]
- --name_by_letters
- Name the contigs A,B,C,... will start at A again if you get to Z
- --prefix PREFIX
- Prefix to add to start of every sequence name
- --seed SEED
- Seed for random number generator. Default is to use python's default
AUTHOR¶
fastaq_make_random_contigs was originally written by Martin Hunt (mh12@sanger.ac.uk)COPYING¶
Wellcome Trust Sanger Institute Copyright © 2013 Wellcome Trust Sanger Institute This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version.October 2014 | Fastaq |