RESTOVER(1e) | EMBOSS Manual for Debian | RESTOVER(1e) |
NAME¶
restover - Find restriction enzymes producing a specific overhangSYNOPSIS¶
restover -sequence seqall
-datafile datafile
-mfile datafile
-seqcomp string
-min integer
-max integer
-single boolean
-threeprime boolean
-blunt boolean
-sticky boolean
-ambiguity boolean
-plasmid boolean
-methylation boolean
-commercial boolean
-html boolean
-limit boolean
-alphabetic boolean
-fragments boolean
-outfile outfile
restover -help
DESCRIPTION¶
restover is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Nucleic:Restriction" command group(s).OPTIONS¶
Input section¶
-sequence seqall -datafile datafile -mfile datafileDefault value: Emethylsites.dat
Required section¶
-seqcomp stringAdvanced section¶
-min integerDefault value: 1
-max integer
Default value: 2000000000
-single boolean
Default value: N
-threeprime boolean
Default value: N
-blunt boolean
Default value: Y
-sticky boolean
Default value: Y
-ambiguity boolean
Default value: Y
-plasmid boolean
Default value: N
-methylation boolean
If this is set then RE recognition sites will not match
methylated bases. Default value: N
-commercial boolean
Default value: Y
Output section¶
-html booleanDefault value: N
-limit boolean
Default value: Y
-alphabetic boolean
Default value: N
-fragments boolean
Default value: N
-outfile outfile
BUGS¶
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).SEE ALSO¶
restover is fully documented via the tfm(1) system.AUTHOR¶
Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>Wrote the script used to autogenerate this manual
page.
COPYRIGHT¶
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.05/11/2012 | EMBOSS 6.4.0 |