DBIGCG(1e) | EMBOSS Manual for Debian | DBIGCG(1e) |
NAME¶
dbigcg - Index a GCG formatted databaseSYNOPSIS¶
dbigcg -dbname string
-idformat list
-directory directory
-filenames string
-release string
-date string
-fields list
-exclude string
-maxindex integer
-sortoptions string
-systemsort boolean
-cleanup boolean
-outfile outfile
-indexoutdir outdir
dbigcg -help
DESCRIPTION¶
dbigcg is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Utils:Database indexing" command group(s).OPTIONS¶
Input section¶
-dbname string -idformat listDefault value: EMBL
-directory directory
Default value: .
-filenames string
Default value: *.seq
Required section¶
-release stringDefault value: 0.0
-date string
Default value: 00/00/00
Advanced section¶
-fields listDefault value: acc
-exclude string
-maxindex integer
-sortoptions string
Sort options, typically '-T .' to use current directory
for work files and '-k 1,1' to force GNU sort to use the first field Default
value: -T . -k 1,1
-systemsort boolean
Default value: Y
-cleanup boolean
Default value: Y
Output section¶
-outfile outfile -indexoutdir outdirDefault value: .
BUGS¶
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).SEE ALSO¶
dbigcg is fully documented via the tfm(1) system.AUTHOR¶
Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>Wrote the script used to autogenerate this manual
page.
COPYRIGHT¶
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.05/11/2012 | EMBOSS 6.4.0 |