.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.46.4.
.TH MSPCOLLECT "1" "April 2016" "MSPCollect 1.08" "User Commands"
.SH NAME
MSPCollect \- convert a BLAST output into an MSP file
.SH SYNOPSIS
.B MSPCollect
BLAST_output_file > name_of_your_MSP_file
.SH DESCRIPTION
Tool which converts a BLAST output into an
MSP file, which is used by the repeatmasker-recon as input.  In the MSP file,
each MSP that BLAST reports is turned into a one-line summary in the
following format:
.IP
score %iden start end query_name start end subject_name
.SH SEE ALSO
.IP
zless /usr/share/doc/repeatmasker-recon/00README.gz
.SH AUTHOR
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.